T3 NUO, Part 1.5, Programs supported by Talon 3

Biology

  • Amber, BLAST+, BLAT, BOOST, BOWTIE, Circos, CUFFLINKS, dDocent, Oases, PAML, SAMTOOLS, SOAPdenovo, TOPHAT, Trinity, Velvet

Chemistry

  • GAMESS, Gaussian, NWChem

Data Science

  • R, Spark, Hadoop

Mathematics

  • Mathematica, MATLAB, Sage

Mechanical Engineering

  • CAMX, Verdi

Material Science

  • VASP, ESPRESSO, LAMMPS, DL_POLY

Physics

  • WARP
  • Linux utitlities/libraries
    • CMAKE, compilers (Intel, GCC, PGI), pearl, Python, BOOST, FFTW, Parallel (IntelMPI, MPICH, OPENMPI, PyMPI), LAPACK, MKL, CUDA, HDF5

Programs can be installed by request

  • To use a program on Talon 3, first you will need to load the module.
  • `module` command
  • This is modify your PATH and Library env variables to run the program
  • `module avail`
    • Shows available programs
  • `module load program`
    • Loads a certain module
    • `module load nwchem/6.5`
  • `module list`
    • Lists all loaded modules